Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs4498834
rs4498834
CACNA1S
8 0.776 0.160 1 201111170 intron variant T/C snv 0.56 0.700 1.000 1 2018 2018
dbSNP: rs2240308
rs2240308
AXIN2
18 0.701 0.360 17 65558473 missense variant G/A snv 0.47 0.39 0.010 1.000 1 2019 2019
dbSNP: rs4904210
rs4904210
PAX9
5 0.851 0.080 14 36666548 missense variant G/C snv 0.36 0.33 0.020 0.500 2 2011 2014
dbSNP: rs55846652
rs55846652 		8 0.776 0.160 X 69564858 downstream gene variant T/C snv 0.29 0.700 1.000 1 2018 2018
dbSNP: rs8670
rs8670
MSX1
4 0.925 0.080 4 4863149 3 prime UTR variant C/T snv 0.22 0.23 0.010 1.000 1 2019 2019
dbSNP: rs917412
rs917412 		8 0.776 0.160 4 108350621 TF binding site variant C/T snv 0.21 0.700 1.000 1 2018 2018
dbSNP: rs11001553
rs11001553
DKK1 ; PRKG1-AS1
2 0.925 0.080 10 52313141 intron variant C/T snv 0.12 0.020 1.000 2 2012 2014
dbSNP: rs7143727
rs7143727
PAX9
2 0.925 0.080 14 36666400 non coding transcript exon variant G/C snv 4.7E-02 0.010 < 0.001 1 2014 2014
dbSNP: rs1095
rs1095
MSX1
2 0.925 0.080 4 4863211 3 prime UTR variant C/T snv 1.5E-02 0.010 1.000 1 2014 2014
dbSNP: rs121908120
rs121908120
WNT10A
19 0.701 0.280 2 218890289 missense variant T/A snv 1.4E-02 1.4E-02 0.810 1.000 2 2018 2019
dbSNP: rs142343894
rs142343894
GREM2
4 0.851 0.080 1 240493250 missense variant G/C snv 1.7E-03 1.8E-03 0.010 1.000 1 2018 2018
dbSNP: rs121908119
rs121908119
WNT10A ; LOC107984111
10 0.763 0.200 2 218882368 stop gained C/A snv 6.2E-04 8.5E-04 0.010 1.000 1 2019 2019
dbSNP: rs139871607
rs139871607
AXIN2
1 1.000 0.080 17 65538235 missense variant T/C snv 7.3E-04 7.3E-04 0.010 1.000 1 2012 2012
dbSNP: rs147680216
rs147680216
WNT10A
11 0.742 0.160 2 218890244 missense variant G/A snv 2.1E-03 6.9E-04 0.010 1.000 1 2017 2017
dbSNP: rs397516654
rs397516654
EDA
2 0.925 0.120 X 70035527 missense variant T/C snv 1.1E-05 3.0E-05 0.700 1.000 1 2010 2010
dbSNP: rs132630321
rs132630321
EDA
4 0.851 0.120 X 70035446 missense variant C/T snv 5.5E-06 9.6E-06 0.010 1.000 1 2009 2009
dbSNP: rs1418913084
rs1418913084
AXIN2
1 1.000 0.080 17 65541504 missense variant A/G snv 4.0E-06 7.0E-06 0.010 1.000 1 2009 2009
dbSNP: rs750190755
rs750190755
WNT10A
3 0.882 0.080 2 218893087 missense variant C/T snv 4.1E-05 7.0E-06 0.010 1.000 1 2017 2017
dbSNP: rs121908568
rs121908568
AXIN2
9 0.807 0.160 17 65536495 stop gained G/A snv 0.020 1.000 2 2004 2016
dbSNP: rs515726227
rs515726227
MSX1
2 0.925 0.080 4 4863139 frameshift variant -/TA delins 0.710 1.000 2 1996 2014
dbSNP: rs730882193
rs730882193
AXIN2
6 0.807 0.200 17 65536472 stop gained C/G;T snv 0.020 1.000 2 2011 2015
dbSNP: rs876657641
rs876657641
EDA
1 1.000 0.080 X 70033470 missense variant G/A;C snv 0.700 1.000 2 2009 2014
dbSNP: rs121909637
rs121909637
FGFR1
3 0.882 0.240 8 38418249 missense variant C/A;T snv 1.2E-05; 2.0E-05 0.010 1.000 1 2019 2019
dbSNP: rs1270965996
rs1270965996
COL1A1
1 1.000 0.080 17 50195463 missense variant C/T snv 0.010 1.000 1 2012 2012
dbSNP: rs12881240
rs12881240
PAX9
1 1.000 0.080 14 36666547 missense variant C/G;T snv 4.9E-06; 0.18 0.010 1.000 1 2014 2014